I do:
sudo pip install --upgrade tables
I get:
/usr/bin/ld: cannot find -lhdf5
collect2: ld returned 1 exit status
.. ERROR:: Could not find a local HDF5 installation.
You may need to explicitly state where your local HDF5 headers and
library can be found by setting the ``HDF5_DIR`` environment
variable or by using the ``--hdf5`` command-line option.
Complete output from command python setup.py egg_info:
/usr/bin/ld: cannot find -lhdf5
however:
$ echo $HDF5_DIR
/opt/hdf5/
$ ls /opt/hdf5/
bin include lib share
$ ls /opt/hdf5/lib/
libhdf5.a libhdf5_hl.la libhdf5_hl.so.8 libhdf5.la libhdf5.so libhdf5.so.8.0.1
libhdf5_hl.a libhdf5_hl.so libhdf5_hl.so.8.0.1 libhdf5.settings libhdf5.so.8
怎么了?如何调试?我已经尝试将 HDF5_DIR 设置为 /opt/ 或 /opt/hdf5/lib。
我在尝试在本地 virtualenv 中工作的 Debian sid 上也遇到了同样的错误。为了解决这个问题,我做了:
apt-get build-dep python-tables
HDF5_DIR=/usr/lib/x86_64-linux-gnu/hdf5/serial/ && pip install tables
...现在它正在工作。
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